Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.72■□□□□ 0.11
KRT6AP02538 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
KRT6AP02538 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KRT6AP02538 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.72■□□□□ 0.11
KRT6AP02538 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.72■□□□□ 0.11
KRT6AP02538 AC245100.5-201ENST00000452108 331 ntBASIC15.72■□□□□ 0.11
KRT6AP02538 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 AC018845.2-201ENST00000568326 409 ntBASIC15.72■□□□□ 0.11
KRT6AP02538 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
KRT6AP02538 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
KRT6AP02538 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KRT6AP02538 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KRT6AP02538 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT6AP02538 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT6AP02538 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6AP02538 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6AP02538 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KRT6AP02538 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6AP02538 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6AP02538 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KRT6AP02538 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 WASH6P-202ENST00000359512 1437 ntBASIC15.71■□□□□ 0.11
KRT6AP02538 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6AP02538 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6AP02538 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KRT6AP02538 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KRT6AP02538 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KRT6AP02538 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6AP02538 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 AC073439.1-201ENST00000624121 1774 ntBASIC15.71■□□□□ 0.11
KRT6AP02538 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.71■□□□□ 0.11
KRT6AP02538 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KRT6AP02538 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT6AP02538 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT6AP02538 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT6AP02538 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6AP02538 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.71■□□□□ 0.1
KRT6AP02538 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6AP02538 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
KRT6AP02538 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT6AP02538 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms