Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.21□□□□□ -0.46
LTAP01374 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LTAP01374 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LTAP01374 AC013726.1-201ENST00000563747 2285 ntBASIC12.21□□□□□ -0.46
LTAP01374 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LTAP01374 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.21□□□□□ -0.46
LTAP01374 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LTAP01374 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LTAP01374 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.21□□□□□ -0.46
LTAP01374 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.21□□□□□ -0.46
LTAP01374 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LTAP01374 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LTAP01374 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.2□□□□□ -0.46
LTAP01374 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.2□□□□□ -0.46
LTAP01374 AC093827.2-201ENST00000512654 315 ntBASIC12.2□□□□□ -0.46
LTAP01374 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 AC099336.1-202ENST00000602961 463 ntBASIC12.2□□□□□ -0.46
LTAP01374 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 AC091951.1-201ENST00000512854 2465 ntBASIC12.2□□□□□ -0.46
LTAP01374 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.2□□□□□ -0.46
LTAP01374 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LTAP01374 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.2□□□□□ -0.46
LTAP01374 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.2□□□□□ -0.46
LTAP01374 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
LTAP01374 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.19□□□□□ -0.46
LTAP01374 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.19□□□□□ -0.46
LTAP01374 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.19□□□□□ -0.46
LTAP01374 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LTAP01374 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LTAP01374 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LTAP01374 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.19□□□□□ -0.46
LTAP01374 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.19□□□□□ -0.46
LTAP01374 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.19□□□□□ -0.46
LTAP01374 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LTAP01374 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
LTAP01374 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LTAP01374 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms