Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 AC004987.2-201ENST00000395959 1148 ntBASIC16.03■□□□□ 0.16
PDGFBP01127 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.03■□□□□ 0.16
PDGFBP01127 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.03■□□□□ 0.16
PDGFBP01127 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PDGFBP01127 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.03■□□□□ 0.16
PDGFBP01127 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFBP01127 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
PDGFBP01127 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFBP01127 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFBP01127 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.02■□□□□ 0.16
PDGFBP01127 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PDGFBP01127 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 ACKR1-201ENST00000368121 1240 ntBASIC16.02■□□□□ 0.16
PDGFBP01127 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.02■□□□□ 0.16
PDGFBP01127 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.02■□□□□ 0.16
PDGFBP01127 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 AP001582.1-201ENST00000525856 295 ntBASIC16.02■□□□□ 0.16
PDGFBP01127 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.02■□□□□ 0.16
PDGFBP01127 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.02■□□□□ 0.16
PDGFBP01127 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.02■□□□□ 0.16
PDGFBP01127 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDGFBP01127 CU633904.3-201ENST00000624042 1029 ntBASIC16.02■□□□□ 0.16
PDGFBP01127 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.02■□□□□ 0.15
PDGFBP01127 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PDGFBP01127 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.02■□□□□ 0.15
PDGFBP01127 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDGFBP01127 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.02■□□□□ 0.15
PDGFBP01127 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PDGFBP01127 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.01■□□□□ 0.15
PDGFBP01127 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.01■□□□□ 0.15
PDGFBP01127 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.01■□□□□ 0.15
PDGFBP01127 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDGFBP01127 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.01■□□□□ 0.15
PDGFBP01127 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDGFBP01127 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms