Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MIR662-201ENST00000384847 95 ntBASIC13.59□□□□□ -0.23
SIX6O95475 SPDYE15P-201ENST00000424157 909 ntBASIC13.59□□□□□ -0.23
SIX6O95475 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.59□□□□□ -0.23
SIX6O95475 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.59□□□□□ -0.23
SIX6O95475 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.59□□□□□ -0.23
SIX6O95475 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SIX6O95475 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SIX6O95475 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.59□□□□□ -0.23
SIX6O95475 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.59□□□□□ -0.23
SIX6O95475 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.59□□□□□ -0.23
SIX6O95475 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 AC005336.2-201ENST00000593183 939 ntBASIC13.59□□□□□ -0.23
SIX6O95475 Z99916.2-201ENST00000604037 246 ntBASIC13.59□□□□□ -0.23
SIX6O95475 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SIX6O95475 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.59□□□□□ -0.23
SIX6O95475 AC141257.4-201ENST00000634557 245 ntBASIC13.59□□□□□ -0.23
SIX6O95475 AC136944.6-201ENST00000634818 245 ntBASIC13.59□□□□□ -0.23
SIX6O95475 PGM5P2-202ENST00000637225 1043 ntBASIC13.59□□□□□ -0.23
SIX6O95475 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SIX6O95475 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SIX6O95475 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.59□□□□□ -0.23
SIX6O95475 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SIX6O95475 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SIX6O95475 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SIX6O95475 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.59□□□□□ -0.23
SIX6O95475 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SIX6O95475 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SIX6O95475 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SIX6O95475 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
SIX6O95475 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SIX6O95475 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
SIX6O95475 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.58□□□□□ -0.23
SIX6O95475 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SIX6O95475 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
SIX6O95475 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SIX6O95475 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SIX6O95475 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.58□□□□□ -0.24
SIX6O95475 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.58□□□□□ -0.24
SIX6O95475 MIR4651-201ENST00000582622 73 ntBASIC13.58□□□□□ -0.24
SIX6O95475 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 AD001527.2-201ENST00000622994 785 ntBASIC13.58□□□□□ -0.24
SIX6O95475 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SIX6O95475 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
SIX6O95475 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SIX6O95475 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SIX6O95475 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SIX6O95475 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SIX6O95475 AC148477.5-201ENST00000625164 1645 ntBASIC13.57□□□□□ -0.24
SIX6O95475 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SIX6O95475 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SIX6O95475 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SIX6O95475 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SIX6O95475 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SIX6O95475 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SIX6O95475 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SIX6O95475 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
SIX6O95475 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms