Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.76■□□□□ 0.59
CTNND1O60716 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.76■□□□□ 0.59
CTNND1O60716 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.76■□□□□ 0.59
CTNND1O60716 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CTNND1O60716 AC133552.6-201ENST00000613406 534 ntBASIC18.76■□□□□ 0.59
CTNND1O60716 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.76■□□□□ 0.59
CTNND1O60716 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTNND1O60716 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTNND1O60716 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CTNND1O60716 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 KRT223P-202ENST00000449164 1292 ntBASIC18.75■□□□□ 0.59
CTNND1O60716 USP32P1-208ENST00000506594 1164 ntBASIC18.75■□□□□ 0.59
CTNND1O60716 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.75■□□□□ 0.59
CTNND1O60716 SNX29P1-201ENST00000548357 1007 ntBASIC18.75■□□□□ 0.59
CTNND1O60716 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.75■□□□□ 0.59
CTNND1O60716 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.75■□□□□ 0.59
CTNND1O60716 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.75■□□□□ 0.59
CTNND1O60716 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.75■□□□□ 0.59
CTNND1O60716 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
CTNND1O60716 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.75■□□□□ 0.59
CTNND1O60716 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CTNND1O60716 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTNND1O60716 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTNND1O60716 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTNND1O60716 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 KRT8P22-201ENST00000562317 1415 ntBASIC18.74■□□□□ 0.59
CTNND1O60716 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
CTNND1O60716 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 AD000864.1-201ENST00000624076 2295 ntBASIC18.74■□□□□ 0.59
CTNND1O60716 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 AC074338.1-201ENST00000416825 156 ntBASIC18.74■□□□□ 0.59
CTNND1O60716 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.74■□□□□ 0.59
CTNND1O60716 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 TARDBPP1-201ENST00000442013 1203 ntBASIC18.74■□□□□ 0.59
CTNND1O60716 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 CROCCP4-201ENST00000457096 498 ntBASIC18.74■□□□□ 0.59
CTNND1O60716 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.74■□□□□ 0.59
CTNND1O60716 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.74■□□□□ 0.59
CTNND1O60716 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.74■□□□□ 0.59
CTNND1O60716 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.74■□□□□ 0.59
CTNND1O60716 AC133539.2-201ENST00000604757 467 ntBASIC18.74■□□□□ 0.59
CTNND1O60716 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.74■□□□□ 0.59
CTNND1O60716 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CTNND1O60716 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTNND1O60716 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTNND1O60716 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms