Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
ZIC3O60481 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.49□□□□□ -0.09
ZIC3O60481 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.49□□□□□ -0.09
ZIC3O60481 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 ZNF890P-202ENST00000530367 1156 ntBASIC14.49□□□□□ -0.09
ZIC3O60481 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.49□□□□□ -0.09
ZIC3O60481 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.49□□□□□ -0.09
ZIC3O60481 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.49□□□□□ -0.09
ZIC3O60481 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZIC3O60481 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
ZIC3O60481 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZIC3O60481 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.49□□□□□ -0.09
ZIC3O60481 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZIC3O60481 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.49□□□□□ -0.09
ZIC3O60481 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC3O60481 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC3O60481 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ZIC3O60481 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.48□□□□□ -0.09
ZIC3O60481 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 FAM8A3P-201ENST00000427218 844 ntBASIC14.48□□□□□ -0.09
ZIC3O60481 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.48□□□□□ -0.09
ZIC3O60481 TSPY16P-201ENST00000449843 468 ntBASIC14.48□□□□□ -0.09
ZIC3O60481 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 RN7SL618P-201ENST00000477850 296 ntBASIC14.48□□□□□ -0.09
ZIC3O60481 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.48□□□□□ -0.09
ZIC3O60481 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.48□□□□□ -0.09
ZIC3O60481 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.48□□□□□ -0.09
ZIC3O60481 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ZIC3O60481 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.48□□□□□ -0.09
ZIC3O60481 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZIC3O60481 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
ZIC3O60481 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ZIC3O60481 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.47□□□□□ -0.09
ZIC3O60481 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.47□□□□□ -0.09
ZIC3O60481 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZIC3O60481 AZGP1P1-201ENST00000411909 902 ntBASIC14.47□□□□□ -0.09
ZIC3O60481 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms