Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
CHMP2AO43633 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
CHMP2AO43633 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHMP2AO43633 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2AO43633 HLA-V-204ENST00000476601 1289 ntBASIC18.16■□□□□ 0.5
CHMP2AO43633 INGX-202ENST00000489074 768 ntBASIC18.16■□□□□ 0.5
CHMP2AO43633 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.16■□□□□ 0.5
CHMP2AO43633 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP2AO43633 SPCS2P1-201ENST00000561636 679 ntBASIC18.16■□□□□ 0.5
CHMP2AO43633 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP2AO43633 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP2AO43633 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 TEX28P1-201ENST00000613479 1221 ntBASIC18.16■□□□□ 0.5
CHMP2AO43633 TEX28P2-201ENST00000617764 1221 ntBASIC18.16■□□□□ 0.5
CHMP2AO43633 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2AO43633 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.16■□□□□ 0.5
CHMP2AO43633 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP2AO43633 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP2AO43633 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP2AO43633 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 AL596087.1-201ENST00000400979 1969 ntBASIC18.15■□□□□ 0.5
CHMP2AO43633 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP2AO43633 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CHMP2AO43633 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 AL080243.2-201ENST00000418783 582 ntBASIC18.15■□□□□ 0.5
CHMP2AO43633 AC241585.1-201ENST00000433527 519 ntBASIC18.15■□□□□ 0.5
CHMP2AO43633 AL512638.1-201ENST00000457493 794 ntBASIC18.15■□□□□ 0.5
CHMP2AO43633 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.15■□□□□ 0.5
CHMP2AO43633 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP2AO43633 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP2AO43633 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CHMP2AO43633 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP2AO43633 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP2AO43633 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP2AO43633 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHMP2AO43633 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CHMP2AO43633 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CHMP2AO43633 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP2AO43633 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP2AO43633 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP2AO43633 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP2AO43633 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP2AO43633 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP2AO43633 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.14■□□□□ 0.5
CHMP2AO43633 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2AO43633 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP2AO43633 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.14■□□□□ 0.49
CHMP2AO43633 CYP4F24P-201ENST00000586049 1580 ntBASIC18.14■□□□□ 0.49
CHMP2AO43633 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms