Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
UPK2O00526 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 HLA-A-201ENST00000376802 1334 ntBASIC12.99□□□□□ -0.33
UPK2O00526 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UPK2O00526 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK2O00526 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.99□□□□□ -0.33
UPK2O00526 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
UPK2O00526 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.99□□□□□ -0.33
UPK2O00526 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.99□□□□□ -0.33
UPK2O00526 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK2O00526 KRT19P2-202ENST00000557173 1012 ntBASIC12.99□□□□□ -0.33
UPK2O00526 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.99□□□□□ -0.33
UPK2O00526 AC018845.2-201ENST00000568326 409 ntBASIC12.99□□□□□ -0.33
UPK2O00526 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.99□□□□□ -0.33
UPK2O00526 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
UPK2O00526 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.99□□□□□ -0.33
UPK2O00526 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.99□□□□□ -0.33
UPK2O00526 AC064836.3-201ENST00000607928 673 ntBASIC12.99□□□□□ -0.33
UPK2O00526 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UPK2O00526 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UPK2O00526 AP003680.1-201ENST00000598970 3660 ntBASIC12.99□□□□□ -0.33
UPK2O00526 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UPK2O00526 AL596257.1-201ENST00000641463 2694 ntBASIC12.99□□□□□ -0.33
UPK2O00526 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
UPK2O00526 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UPK2O00526 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UPK2O00526 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.98□□□□□ -0.33
UPK2O00526 AP001282.1-201ENST00000531301 1499 ntBASIC12.98□□□□□ -0.33
UPK2O00526 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
UPK2O00526 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK2O00526 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK2O00526 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK2O00526 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.98□□□□□ -0.33
UPK2O00526 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.98□□□□□ -0.33
UPK2O00526 AC145285.3-201ENST00000564603 959 ntBASIC12.98□□□□□ -0.33
UPK2O00526 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.98□□□□□ -0.33
UPK2O00526 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
UPK2O00526 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
UPK2O00526 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
UPK2O00526 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
UPK2O00526 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK2O00526 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 AC104109.2-201ENST00000602919 1418 ntBASIC12.97□□□□□ -0.33
UPK2O00526 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UPK2O00526 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 AC073347.1-201ENST00000421633 2643 ntBASIC12.97□□□□□ -0.33
UPK2O00526 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK2O00526 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms