Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.36■□□□□ 0.21
AP3B1O00203 AC243562.2-201ENST00000561247 970 ntBASIC16.36■□□□□ 0.21
AP3B1O00203 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.36■□□□□ 0.21
AP3B1O00203 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 AC120114.3-201ENST00000611923 658 ntBASIC16.36■□□□□ 0.21
AP3B1O00203 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3B1O00203 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
AP3B1O00203 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3B1O00203 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3B1O00203 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.35■□□□□ 0.21
AP3B1O00203 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3B1O00203 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3B1O00203 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.35■□□□□ 0.21
AP3B1O00203 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.35■□□□□ 0.21
AP3B1O00203 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
AP3B1O00203 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3B1O00203 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3B1O00203 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP3B1O00203 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3B1O00203 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
AP3B1O00203 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP3B1O00203 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP3B1O00203 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3B1O00203 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
AP3B1O00203 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP3B1O00203 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP3B1O00203 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.34■□□□□ 0.21
AP3B1O00203 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.34■□□□□ 0.21
AP3B1O00203 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.34■□□□□ 0.21
AP3B1O00203 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.34■□□□□ 0.21
AP3B1O00203 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 TFAMP1-201ENST00000412727 736 ntBASIC16.34■□□□□ 0.21
AP3B1O00203 AL355306.1-201ENST00000415580 579 ntBASIC16.34■□□□□ 0.21
AP3B1O00203 ACTG1P14-201ENST00000446382 1122 ntBASIC16.34■□□□□ 0.21
AP3B1O00203 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 AC040169.1-201ENST00000565382 521 ntBASIC16.34■□□□□ 0.21
AP3B1O00203 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.34■□□□□ 0.21
AP3B1O00203 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP3B1O00203 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
AP3B1O00203 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
AP3B1O00203 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3B1O00203 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms