Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV5A0A0B4J249 AC129492.6-201ENST00000611383 1305 ntBASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 AC099063.4-201ENST00000641099 1602 ntBASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 AC008677.1-201ENST00000519230 1561 ntBASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 RPS15P9-201ENST00000494093 319 ntBASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 AL160237.2-201ENST00000556165 472 ntBASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV5A0A0B4J249 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 U82695.1-201ENST00000635752 1889 ntBASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 AC025062.2-201ENST00000605477 670 ntBASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 GGTLC5P-201ENST00000617623 998 ntBASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms