Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 GGT3P-204ENST00000453783 1664 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 ANKRD19P-201ENST00000338192 862 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 FAM86MP-201ENST00000340703 885 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 BNIP3P42-201ENST00000454982 569 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SLC25A47P1-201ENST00000531577 414 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AC243562.2-201ENST00000561247 970 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 BNIP3P29-201ENST00000598302 571 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AL391069.4-201ENST00000609583 481 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AC011447.5-201ENST00000616168 564 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 AL158212.4-201ENST00000624062 1286 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC187A0A096LP49 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 KLF2P4-201ENST00000451959 1225 ntBASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms