Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA3Q9Y5H8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA3Q9Y5H8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA3Q9Y5H8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHA3Q9Y5H8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA3Q9Y5H8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA3Q9Y5H8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHA3Q9Y5H8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 AC134407.2-201ENST00000625089 1978 ntBASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PCDHA3Q9Y5H8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AC009078.2-202ENST00000463353 338 ntBASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA3Q9Y5H8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 AC104109.2-201ENST00000602919 1418 ntBASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 AP002472.1-201ENST00000577490 586 ntBASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHA3Q9Y5H8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms