Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 SPDYE7P-202ENST00000420373 878 ntBASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 GAPDHP21-201ENST00000450301 1010 ntBASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 AP005018.1-201ENST00000525475 301 ntBASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 AC018695.7-201ENST00000624587 2492 ntBASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB1Q9Y5F3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 AC097493.3-201ENST00000509725 367 ntBASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 KRT8P23-201ENST00000560090 1207 ntBASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 AL158211.3-201ENST00000607385 239 ntBASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHB1Q9Y5F3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AC245100.5-201ENST00000452108 331 ntBASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AC105233.2-201ENST00000523697 349 ntBASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AC069120.2-201ENST00000524091 540 ntBASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AF228730.5-201ENST00000530288 346 ntBASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB1Q9Y5F3 AC073389.1-201ENST00000595595 795 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms