Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL158212.4-201ENST00000624062 1286 ntBASIC16.78■□□□□ 0.28
YIPF1Q9Y548 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 CLK3P2-201ENST00000427566 1453 ntBASIC16.78■□□□□ 0.28
YIPF1Q9Y548 AP001282.1-201ENST00000531301 1499 ntBASIC16.78■□□□□ 0.28
YIPF1Q9Y548 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.78■□□□□ 0.28
YIPF1Q9Y548 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 TARDBPP1-201ENST00000442013 1203 ntBASIC16.77■□□□□ 0.28
YIPF1Q9Y548 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 AL359881.2-201ENST00000602973 570 ntBASIC16.77■□□□□ 0.28
YIPF1Q9Y548 AL391069.4-201ENST00000609583 481 ntBASIC16.77■□□□□ 0.28
YIPF1Q9Y548 MIR8072-201ENST00000614241 80 ntBASIC16.77■□□□□ 0.28
YIPF1Q9Y548 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
YIPF1Q9Y548 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
YIPF1Q9Y548 AC134407.2-201ENST00000625089 1978 ntBASIC16.77■□□□□ 0.27
YIPF1Q9Y548 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 TTTY23B-201ENST00000442790 549 ntBASIC16.76■□□□□ 0.27
YIPF1Q9Y548 AC104596.2-201ENST00000512793 793 ntBASIC16.76■□□□□ 0.27
YIPF1Q9Y548 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 IGHV3-71-201ENST00000523324 359 ntBASIC16.76■□□□□ 0.27
YIPF1Q9Y548 TMEM261P1-201ENST00000604899 340 ntBASIC16.76■□□□□ 0.27
YIPF1Q9Y548 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YIPF1Q9Y548 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YIPF1Q9Y548 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms