Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
FOXD3Q9UJU5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.47□□□□□ -0.09
FOXD3Q9UJU5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FOXD3Q9UJU5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FOXD3Q9UJU5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FOXD3Q9UJU5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 AC004233.3-201ENST00000607794 1269 ntBASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 AL138828.2-201ENST00000615812 383 ntBASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FOXD3Q9UJU5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 AC026691.1-201ENST00000602502 2017 ntBASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
FOXD3Q9UJU5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 TSSK5P-201ENST00000423978 907 ntBASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 AL513523.2-202ENST00000427283 2040 ntBASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 AL365330.1-201ENST00000607459 531 ntBASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SPDYE12P-201ENST00000618416 771 ntBASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms