Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC018845.2-201ENST00000568326 409 ntBASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 AC064836.3-201ENST00000607928 673 ntBASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 GPALPP1-207ENST00000611650 899 ntBASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRTM1Q9HBL6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 AL589702.1-201ENST00000641229 1509 ntBASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
LRTM1Q9HBL6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 KRT19P2-202ENST00000557173 1012 ntBASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 PMS2P7-201ENST00000506558 1336 ntBASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 AC104109.2-201ENST00000602919 1418 ntBASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRTM1Q9HBL6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC145285.3-201ENST00000564603 959 ntBASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC002347.1-201ENST00000569543 541 ntBASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 WASH6P-202ENST00000359512 1437 ntBASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms