Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.37■□□□□ 0.37
NXF3Q9H4D5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 TPRX2P-201ENST00000535362 881 ntBASIC17.37■□□□□ 0.37
NXF3Q9H4D5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 SLC7A15P-201ENST00000424028 1363 ntBASIC17.37■□□□□ 0.37
NXF3Q9H4D5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NXF3Q9H4D5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 HAUS4P1-201ENST00000406739 1145 ntBASIC17.36■□□□□ 0.37
NXF3Q9H4D5 COX5BP8-201ENST00000416911 349 ntBASIC17.36■□□□□ 0.37
NXF3Q9H4D5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 AC092337.1-201ENST00000568699 1129 ntBASIC17.36■□□□□ 0.37
NXF3Q9H4D5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 LINC01115-203ENST00000606068 577 ntBASIC17.36■□□□□ 0.37
NXF3Q9H4D5 AC008494.3-201ENST00000606615 944 ntBASIC17.36■□□□□ 0.37
NXF3Q9H4D5 AL358472.5-202ENST00000641448 1267 ntBASIC17.36■□□□□ 0.37
NXF3Q9H4D5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NXF3Q9H4D5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 DGCR5-201ENST00000399539 862 ntBASIC17.35■□□□□ 0.37
NXF3Q9H4D5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 AC055876.2-201ENST00000531834 546 ntBASIC17.35■□□□□ 0.37
NXF3Q9H4D5 AC007431.3-201ENST00000623221 587 ntBASIC17.35■□□□□ 0.37
NXF3Q9H4D5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 AC063926.2-201ENST00000623766 1308 ntBASIC17.35■□□□□ 0.37
NXF3Q9H4D5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 AL391825.1-201ENST00000457671 1364 ntBASIC17.35■□□□□ 0.37
NXF3Q9H4D5 PCDH8P1-201ENST00000428983 2773 ntBASIC17.35■□□□□ 0.37
NXF3Q9H4D5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms