Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 AP006288.1-201ENST00000446065 395 ntBASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 SNHG9-202ENST00000564014 471 ntBASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 AC013268.4-201ENST00000637413 2228 ntBASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
FOXP3Q9BZS1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 KRT18P28-201ENST00000453838 1332 ntBASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 METTL21AP1-201ENST00000438852 635 ntBASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 PRSS29P-201ENST00000440800 595 ntBASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 AC021097.1-201ENST00000607902 574 ntBASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FOXP3Q9BZS1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 AC020658.6-201ENST00000623564 1870 ntBASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 TMBIM7P-203ENST00000641617 1718 ntBASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 HTR5BP-201ENST00000430851 1154 ntBASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms