Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 PGAM5P1-201ENST00000518923 814 ntBASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 AL138918.1-201ENST00000568306 659 ntBASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UPF3BQ9BZI7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 MED15P5-201ENST00000423150 992 ntBASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 PRYP6-201ENST00000514804 343 ntBASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 AC002347.1-201ENST00000569543 541 ntBASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 AP001160.2-201ENST00000596071 487 ntBASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.31■□□□□ 0.68
UPF3BQ9BZI7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 AC092850.2-201ENST00000623821 2697 ntBASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 KRT18P3-201ENST00000451602 1288 ntBASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.3■□□□□ 0.68
UPF3BQ9BZI7 MIR3687-2-201ENST00000577708 61 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms