Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 FBP2-201ENST00000375337 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 RBMS3-201ENST00000273139 1598 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC112206.2-203ENST00000513234 1556 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 RBMY1D-203ENST00000418956 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC005702.1-202ENST00000586209 1603 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 GAPDHP72-203ENST00000638093 1602 ntTSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 RNU5B-4P-201ENST00000363508 111 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 Y_RNA.560-201ENST00000384689 102 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 VN1R12P-201ENST00000403778 876 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 HES6-206ENST00000409574 738 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 HMGN2P17-201ENST00000425872 743 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM185BP-201ENST00000443595 716 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 VN1R96P-201ENST00000446052 858 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 ACTR3P3-201ENST00000480448 893 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC008868.1-201ENST00000509786 737 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 IGHV3-30-2-201ENST00000517460 355 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CETN3-205ENST00000522842 664 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AP005435.1-201ENST00000529293 1178 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 TRAPPC1-202ENST00000540486 759 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC010203.2-201ENST00000550886 418 ntTSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 NTS-203ENST00000551529 801 ntTSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CYP19A1-210ENST00000557858 832 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 EIF4A2P1-201ENST00000587313 1063 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AL133227.1-201ENST00000612368 594 ntTSL 4 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC098476.1-201ENST00000623173 1025 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC022743.1-201ENST00000624990 664 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC127502.3-201ENST00000636170 1206 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 OCIAD1-201ENST00000264312 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC091046.3-201ENST00000631455 1574 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AC107982.1-201ENST00000507171 1300 ntBASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms