Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AP003680.1-201ENST00000598970 3660 ntBASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 SSR4P1-203ENST00000599569 2260 ntBASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 EMBP1-201ENST00000458200 901 ntBASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC092910.1-201ENST00000482027 1129 ntBASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL009183.1-201ENST00000603760 355 ntBASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC148477.8-201ENST00000624298 468 ntBASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMBIM7P-203ENST00000641617 1718 ntBASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SHANK2-AS3Q9BTD1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 AL078644.1-201ENST00000609881 752 ntBASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SHANK2-AS3Q9BTD1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms