Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.24■□□□□ 0.35
ALPK3Q96L96 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 RPL13AP19-201ENST00000434320 584 ntBASIC17.24■□□□□ 0.35
ALPK3Q96L96 COX5BP1-201ENST00000507622 393 ntBASIC17.24■□□□□ 0.35
ALPK3Q96L96 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 AC073413.1-201ENST00000603927 732 ntBASIC17.24■□□□□ 0.35
ALPK3Q96L96 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.24■□□□□ 0.35
ALPK3Q96L96 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALPK3Q96L96 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AC234782.1-201ENST00000451950 919 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AP002490.2-201ENST00000524791 560 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 GGT3P-204ENST00000453783 1664 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 PDIA3P2-201ENST00000428073 158 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AL391256.1-201ENST00000443260 1855 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 MIR6756-201ENST00000616240 63 ntBASIC17.23■□□□□ 0.35
ALPK3Q96L96 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.23■□□□□ 0.35
ALPK3Q96L96 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALPK3Q96L96 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALPK3Q96L96 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALPK3Q96L96 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ALPK3Q96L96 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.22■□□□□ 0.35
ALPK3Q96L96 AC020916.1-201ENST00000587762 1774 ntBASIC17.22■□□□□ 0.35
ALPK3Q96L96 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.22■□□□□ 0.35
ALPK3Q96L96 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALPK3Q96L96 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms