Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDCA5Q96FF9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA5Q96FF9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.67■□□□□ 0.58
CDCA5Q96FF9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CDCA5Q96FF9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.67■□□□□ 0.58
CDCA5Q96FF9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AC138028.6-201ENST00000616106 1482 ntBASIC18.66■□□□□ 0.58
CDCA5Q96FF9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 FNTAP2-201ENST00000430308 634 ntBASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AP006547.1-201ENST00000563435 692 ntBASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.66■□□□□ 0.58
CDCA5Q96FF9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AC004898.1-201ENST00000451057 766 ntBASIC18.65■□□□□ 0.58
CDCA5Q96FF9 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AP001582.1-201ENST00000525856 295 ntBASIC18.65■□□□□ 0.58
CDCA5Q96FF9 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDCA5Q96FF9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA5Q96FF9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.64■□□□□ 0.58
CDCA5Q96FF9 AL592424.1-201ENST00000563624 1536 ntBASIC18.64■□□□□ 0.58
CDCA5Q96FF9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CDCA5Q96FF9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.64■□□□□ 0.58
CDCA5Q96FF9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA5Q96FF9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.64■□□□□ 0.58
CDCA5Q96FF9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDCA5Q96FF9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 AC091804.1-201ENST00000486888 567 ntBASIC18.64■□□□□ 0.57
CDCA5Q96FF9 HIST2H2BC-201ENST00000498492 580 ntBASIC18.64■□□□□ 0.57
CDCA5Q96FF9 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 MIR6727-201ENST00000620702 65 ntBASIC18.64■□□□□ 0.57
CDCA5Q96FF9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 AHCYP2-201ENST00000430630 1300 ntBASIC18.64■□□□□ 0.57
CDCA5Q96FF9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDCA5Q96FF9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms