Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 MIR4751-201ENST00000578027 74 ntBASIC18.41■□□□□ 0.54
ERCC4Q92889 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
ERCC4Q92889 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.41■□□□□ 0.54
ERCC4Q92889 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERCC4Q92889 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ERCC4Q92889 AL031008.1-201ENST00000619963 541 ntBASIC18.41■□□□□ 0.54
ERCC4Q92889 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ERCC4Q92889 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.41■□□□□ 0.54
ERCC4Q92889 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERCC4Q92889 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERCC4Q92889 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.41■□□□□ 0.54
ERCC4Q92889 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC4Q92889 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC4Q92889 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC4Q92889 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 AC136621.1-201ENST00000624017 2304 ntBASIC18.4■□□□□ 0.54
ERCC4Q92889 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
ERCC4Q92889 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ERCC4Q92889 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 AL513480.1-201ENST00000451731 511 ntBASIC18.4■□□□□ 0.54
ERCC4Q92889 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.4■□□□□ 0.54
ERCC4Q92889 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ERCC4Q92889 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 AL031055.1-201ENST00000606362 631 ntBASIC18.4■□□□□ 0.54
ERCC4Q92889 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC4Q92889 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC4Q92889 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC4Q92889 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC4Q92889 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
ERCC4Q92889 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC4Q92889 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.39■□□□□ 0.54
ERCC4Q92889 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC4Q92889 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC4Q92889 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ERCC4Q92889 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.39■□□□□ 0.54
ERCC4Q92889 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC4Q92889 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
ERCC4Q92889 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ERCC4Q92889 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 AC016027.1-202ENST00000607927 1699 ntBASIC18.39■□□□□ 0.53
ERCC4Q92889 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC4Q92889 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.39■□□□□ 0.53
ERCC4Q92889 AC108751.1-201ENST00000490852 363 ntBASIC18.39■□□□□ 0.53
ERCC4Q92889 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC4Q92889 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.39■□□□□ 0.53
ERCC4Q92889 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ERCC4Q92889 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.39■□□□□ 0.53
ERCC4Q92889 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ERCC4Q92889 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.39■□□□□ 0.53
ERCC4Q92889 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC4Q92889 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC4Q92889 LINC02228-204ENST00000642115 2962 ntBASIC18.39■□□□□ 0.53
ERCC4Q92889 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC4Q92889 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC4Q92889 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC4Q92889 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ERCC4Q92889 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC4Q92889 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC4Q92889 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC4Q92889 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC4Q92889 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC4Q92889 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ERCC4Q92889 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC4Q92889 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms