Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.65□□□□□ -0.7
ALMS1Q8TCU4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 KRTAP19-9P-201ENST00000421795 191 ntBASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 AL354877.1-201ENST00000424412 413 ntBASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 RN7SL736P-201ENST00000613111 269 ntBASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
ALMS1Q8TCU4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AL691432.1-201ENST00000596308 1422 ntBASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AC022748.3-201ENST00000621828 275 ntBASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 CEP164P1-201ENST00000455142 418 ntBASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 FOS-204ENST00000554617 796 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 BNIP3P1-202ENST00000550043 1585 ntBASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC10.64□□□□□ -0.71
ALMS1Q8TCU4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 GHSR-202ENST00000427970 912 ntBASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms