Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 AC096734.2-201ENST00000562054 433 ntBASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 AL009183.1-201ENST00000603760 355 ntBASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLHC1Q8NHS4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLHC1Q8NHS4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 AC016027.1-202ENST00000607927 1699 ntBASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 AC093724.1-201ENST00000448659 1027 ntBASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 Z83851.2-201ENST00000609564 659 ntBASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 HLA-A-201ENST00000376802 1334 ntBASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 AC068587.6-202ENST00000641839 5619 ntBASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLHC1Q8NHS4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 RHOQP3-201ENST00000437982 621 ntBASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 AC023141.13-201ENST00000604991 943 ntBASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 BCAR1-209ENST00000546196 1340 ntBASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLHC1Q8NHS4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms