Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NUP43Q8NFH3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 HTR5BP-201ENST00000430851 1154 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 AP000347.1-202ENST00000435868 847 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 MKNK2P1-201ENST00000437526 628 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 KRT8P48-201ENST00000515599 1220 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 AC024267.1-201ENST00000582320 895 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 FOXO1B-201ENST00000504678 1527 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 PRAL-201ENST00000624952 3286 ntBASIC15.15■□□□□ 0.02
NUP43Q8NFH3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.15■□□□□ 0.02
NUP43Q8NFH3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 GPX1P2-201ENST00000429271 606 ntBASIC15.14■□□□□ 0.01
NUP43Q8NFH3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 SPCS2P4-201ENST00000436160 681 ntBASIC15.14■□□□□ 0.01
NUP43Q8NFH3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 ALG1L5P-201ENST00000482043 771 ntBASIC15.14■□□□□ 0.01
NUP43Q8NFH3 AC079140.1-201ENST00000508039 487 ntBASIC15.14■□□□□ 0.01
NUP43Q8NFH3 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 IGHV3-62-201ENST00000520057 340 ntBASIC15.14■□□□□ 0.01
NUP43Q8NFH3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms