Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 AL031284.1-201ENST00000419297 478 ntBASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 AP002469.2-201ENST00000531724 424 ntBASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 AL365330.1-201ENST00000607459 531 ntBASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 AC007064.4-201ENST00000637740 555 ntBASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 MYO15B-237ENST00000642007 4893 ntBASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AC092919.2-201ENST00000623631 1645 ntBASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 UNC93B6-202ENST00000528242 690 ntBASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AC109635.5-201ENST00000533593 962 ntBASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AC096734.2-201ENST00000562054 433 ntBASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 RN7SL510P-201ENST00000581311 263 ntBASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AL691432.3-201ENST00000621860 400 ntBASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
VPS37AQ8NEZ2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VPS37AQ8NEZ2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS37AQ8NEZ2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS37AQ8NEZ2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms