Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNYL1Q8N7R7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCNYL1Q8N7R7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNYL1Q8N7R7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNYL1Q8N7R7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCNYL1Q8N7R7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCNYL1Q8N7R7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 HMGA1P7-201ENST00000406908 502 ntBASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 AL031055.1-201ENST00000606362 631 ntBASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 TP73-AS1-207ENST00000624167 988 ntBASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 AC007326.2-201ENST00000624224 7579 ntBASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL1Q8N7R7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 AC013268.4-201ENST00000637413 2228 ntBASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL1Q8N7R7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL1Q8N7R7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms