Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COMMD1Q8N668 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
COMMD1Q8N668 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.54□□□□□ -0.24
COMMD1Q8N668 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD1Q8N668 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 AP002414.1-201ENST00000391405 1147 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 LINC00982-205ENST00000420957 435 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 UNC93B6-202ENST00000528242 690 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 AL353135.1-201ENST00000606729 504 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 AC002310.6-201ENST00000624451 1377 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 AC104109.2-201ENST00000602919 1418 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 AP002414.3-201ENST00000589352 1468 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 AL161772.1-201ENST00000610494 4412 ntBASIC13.53□□□□□ -0.24
COMMD1Q8N668 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
COMMD1Q8N668 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.53□□□□□ -0.24
COMMD1Q8N668 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.52□□□□□ -0.24
COMMD1Q8N668 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
COMMD1Q8N668 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.52□□□□□ -0.24
COMMD1Q8N668 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.52□□□□□ -0.24
COMMD1Q8N668 PPT1-215ENST00000641471 2368 ntBASIC13.52□□□□□ -0.24
COMMD1Q8N668 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.52□□□□□ -0.24
COMMD1Q8N668 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
COMMD1Q8N668 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 MIR574-201ENST00000385209 96 ntBASIC13.52□□□□□ -0.25
COMMD1Q8N668 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 TERC-201ENST00000602385 541 ntBASIC13.52□□□□□ -0.25
COMMD1Q8N668 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 AC008667.4-201ENST00000607370 168 ntBASIC13.52□□□□□ -0.25
COMMD1Q8N668 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
COMMD1Q8N668 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
COMMD1Q8N668 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms