Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 AL596442.2-201ENST00000610240 980 ntBASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 FAM58DP-201ENST00000428076 619 ntBASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 RARRES2P9-201ENST00000565168 469 ntBASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 AL691403.2-201ENST00000618460 490 ntBASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 AC009093.7-201ENST00000623853 1223 ntBASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 AP3S2-216ENST00000617003 1561 ntBASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 LINC02199-201ENST00000506655 2702 ntBASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 CDC14C-201ENST00000428251 1719 ntBASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATPAF2Q8N5M1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 LINC02447-202ENST00000501888 2146 ntBASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.25
ATPAF2Q8N5M1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 DNAJB3-202ENST00000449667 1266 ntBASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 ALG1L8P-201ENST00000533887 760 ntBASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 AC079781.4-201ENST00000641908 219 ntBASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 AC069224.1-201ENST00000566372 1715 ntBASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATPAF2Q8N5M1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATPAF2Q8N5M1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms