Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 PCDHA14-201ENST00000506751 2298 ntBASIC20.27■□□□□ 0.84
COPS6Q7L5N1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 OR8S1-201ENST00000310194 1080 ntBASIC20.27■□□□□ 0.84
COPS6Q7L5N1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 AL391069.4-201ENST00000609583 481 ntBASIC20.27■□□□□ 0.84
COPS6Q7L5N1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
COPS6Q7L5N1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COPS6Q7L5N1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPS6Q7L5N1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COPS6Q7L5N1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AP001282.1-201ENST00000531301 1499 ntBASIC20.26■□□□□ 0.83
COPS6Q7L5N1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AL512384.1-201ENST00000406683 331 ntBASIC20.26■□□□□ 0.83
COPS6Q7L5N1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 GIMAP3P-201ENST00000495150 836 ntBASIC20.26■□□□□ 0.83
COPS6Q7L5N1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 AL662844.4-201ENST00000606367 2838 ntBASIC20.26■□□□□ 0.83
COPS6Q7L5N1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COPS6Q7L5N1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 CDC14C-201ENST00000428251 1719 ntBASIC20.25■□□□□ 0.83
COPS6Q7L5N1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 PHKG1P2-201ENST00000457537 863 ntBASIC20.25■□□□□ 0.83
COPS6Q7L5N1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 RRP7BP-205ENST00000566851 833 ntBASIC20.25■□□□□ 0.83
COPS6Q7L5N1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 REXO1L1P-202ENST00000608646 1974 ntBASIC20.25■□□□□ 0.83
COPS6Q7L5N1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COPS6Q7L5N1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.24■□□□□ 0.83
COPS6Q7L5N1 KRT18P64-201ENST00000434946 1219 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms