Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
TREML4Q6UXN2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AC055876.3-201ENST00000431496 288 ntBASIC13.36□□□□□ -0.27
TREML4Q6UXN2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 AC138649.4-201ENST00000612222 287 ntBASIC13.36□□□□□ -0.27
TREML4Q6UXN2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TREML4Q6UXN2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 AL596087.1-201ENST00000400979 1969 ntBASIC13.35□□□□□ -0.27
TREML4Q6UXN2 OR8S1-201ENST00000310194 1080 ntBASIC13.35□□□□□ -0.27
TREML4Q6UXN2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 AL627223.1-201ENST00000416693 442 ntBASIC13.35□□□□□ -0.27
TREML4Q6UXN2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 ACTG1P4-201ENST00000425123 1122 ntBASIC13.35□□□□□ -0.27
TREML4Q6UXN2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.35□□□□□ -0.27
TREML4Q6UXN2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms