Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTR9Q6PD62 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.18■□□□□ 0.66
CTR9Q6PD62 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CTR9Q6PD62 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
CTR9Q6PD62 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 AC103702.1-201ENST00000548801 2630 ntBASIC19.18■□□□□ 0.66
CTR9Q6PD62 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTR9Q6PD62 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 AL691432.1-201ENST00000596308 1422 ntBASIC19.17■□□□□ 0.66
CTR9Q6PD62 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 AC245100.5-201ENST00000452108 331 ntBASIC19.17■□□□□ 0.66
CTR9Q6PD62 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 AC010336.2-201ENST00000564226 506 ntBASIC19.17■□□□□ 0.66
CTR9Q6PD62 AC008738.7-201ENST00000609744 511 ntBASIC19.17■□□□□ 0.66
CTR9Q6PD62 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CTR9Q6PD62 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 AC006449.6-201ENST00000612330 2296 ntBASIC19.17■□□□□ 0.66
CTR9Q6PD62 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTR9Q6PD62 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.16■□□□□ 0.66
CTR9Q6PD62 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTR9Q6PD62 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 HIST3H2BA-201ENST00000436555 524 ntBASIC19.15■□□□□ 0.66
CTR9Q6PD62 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 AC138761.1-201ENST00000584393 385 ntBASIC19.15■□□□□ 0.66
CTR9Q6PD62 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 LINC02560-201ENST00000596379 459 ntBASIC19.15■□□□□ 0.66
CTR9Q6PD62 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms