Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN20Q4JDL3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17■□□□□ 0.31
PTPN20Q4JDL3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 BNIP3P1-202ENST00000550043 1585 ntBASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AC139530.3-201ENST00000620344 690 ntBASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AC011477.6-201ENST00000604980 1927 ntBASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 AP003680.1-201ENST00000598970 3660 ntBASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.99■□□□□ 0.31
PTPN20Q4JDL3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 PRAL-201ENST00000624952 3286 ntBASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 AL139400.1-201ENST00000366220 510 ntBASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 AC243562.2-201ENST00000561247 970 ntBASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 AP001059.3-201ENST00000619053 235 ntBASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 CYP4F24P-201ENST00000586049 1580 ntBASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTPN20Q4JDL3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 CICP6-201ENST00000457191 2729 ntBASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN20Q4JDL3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms