Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AC023274.1-201ENST00000418278 595 ntBASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 PDPK2P-202ENST00000562415 1191 ntBASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 AC018845.2-201ENST00000568326 409 ntBASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 AC004877.2-201ENST00000623941 599 ntBASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 AL645728.2-201ENST00000641974 660 ntBASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF3Q3KNV8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 YBX2P1-201ENST00000394192 760 ntBASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 MIR1233-2-201ENST00000408138 82 ntBASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 MIR1233-1-201ENST00000408722 82 ntBASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 AL513480.1-201ENST00000451731 511 ntBASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 GPALPP1-207ENST00000611650 899 ntBASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 AC073347.1-201ENST00000421633 2643 ntBASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.41□□□□□ -0.1
PCGF3Q3KNV8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 UPF3AP3-201ENST00000420996 769 ntBASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 KRT19P2-202ENST00000557173 1012 ntBASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.4□□□□□ -0.1
PCGF3Q3KNV8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms