Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDH17Q12864 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 FOXO1B-201ENST00000504678 1527 ntBASIC16.35■□□□□ 0.21
CDH17Q12864 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CDH17Q12864 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH17Q12864 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CDH17Q12864 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CDH17Q12864 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 YBX2P1-201ENST00000394192 760 ntBASIC16.35■□□□□ 0.21
CDH17Q12864 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH17Q12864 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH17Q12864 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.35■□□□□ 0.21
CDH17Q12864 SPDYE11-202ENST00000450699 704 ntBASIC16.35■□□□□ 0.21
CDH17Q12864 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.35■□□□□ 0.21
CDH17Q12864 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
CDH17Q12864 SPDYE9P-201ENST00000570642 692 ntBASIC16.35■□□□□ 0.21
CDH17Q12864 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH17Q12864 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH17Q12864 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH17Q12864 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH17Q12864 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 AC026120.1-201ENST00000611536 926 ntBASIC16.35■□□□□ 0.21
CDH17Q12864 SPDYE10P-202ENST00000612005 668 ntBASIC16.35■□□□□ 0.21
CDH17Q12864 SPDYE8P-202ENST00000612377 668 ntBASIC16.35■□□□□ 0.21
CDH17Q12864 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
CDH17Q12864 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CDH17Q12864 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH17Q12864 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH17Q12864 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH17Q12864 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH17Q12864 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDH17Q12864 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH17Q12864 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH17Q12864 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH17Q12864 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH17Q12864 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH17Q12864 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH17Q12864 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 AC142381.1-201ENST00000426099 345 ntBASIC16.34■□□□□ 0.21
CDH17Q12864 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH17Q12864 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH17Q12864 AC243562.1-201ENST00000560672 389 ntBASIC16.34■□□□□ 0.21
CDH17Q12864 AC061975.2-201ENST00000581722 295 ntBASIC16.34■□□□□ 0.21
CDH17Q12864 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 MTDHP5-201ENST00000598980 586 ntBASIC16.34■□□□□ 0.21
CDH17Q12864 C20orf181-201ENST00000623918 480 ntBASIC16.34■□□□□ 0.21
CDH17Q12864 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH17Q12864 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH17Q12864 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH17Q12864 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDH17Q12864 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH17Q12864 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH17Q12864 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH17Q12864 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CDH17Q12864 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.33■□□□□ 0.21
CDH17Q12864 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms