Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2BQ00403 AC027369.6-201ENST00000525520 931 ntBASIC17.58■□□□□ 0.4
GTF2BQ00403 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.58■□□□□ 0.4
GTF2BQ00403 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.58■□□□□ 0.4
GTF2BQ00403 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2BQ00403 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2BQ00403 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2BQ00403 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2BQ00403 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.58■□□□□ 0.4
GTF2BQ00403 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.58■□□□□ 0.4
GTF2BQ00403 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.58■□□□□ 0.4
GTF2BQ00403 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.58■□□□□ 0.4
GTF2BQ00403 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.58■□□□□ 0.4
GTF2BQ00403 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2BQ00403 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2BQ00403 AC022188.1-201ENST00000620960 1664 ntBASIC17.58■□□□□ 0.4
GTF2BQ00403 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GTF2BQ00403 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2BQ00403 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2BQ00403 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2BQ00403 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2BQ00403 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2BQ00403 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.57■□□□□ 0.4
GTF2BQ00403 AL590560.3-201ENST00000623350 461 ntBASIC17.57■□□□□ 0.4
GTF2BQ00403 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2BQ00403 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.57■□□□□ 0.4
GTF2BQ00403 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.57■□□□□ 0.4
GTF2BQ00403 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
GTF2BQ00403 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2BQ00403 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.57■□□□□ 0.4
GTF2BQ00403 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GTF2BQ00403 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2BQ00403 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
GTF2BQ00403 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GTF2BQ00403 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GTF2BQ00403 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GTF2BQ00403 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GTF2BQ00403 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
GTF2BQ00403 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.56■□□□□ 0.4
GTF2BQ00403 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.56■□□□□ 0.4
GTF2BQ00403 AZGP1P1-201ENST00000411909 902 ntBASIC17.56■□□□□ 0.4
GTF2BQ00403 PHKG1P2-201ENST00000457537 863 ntBASIC17.56■□□□□ 0.4
GTF2BQ00403 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.56■□□□□ 0.4
GTF2BQ00403 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.56■□□□□ 0.4
GTF2BQ00403 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.56■□□□□ 0.4
GTF2BQ00403 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GTF2BQ00403 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GTF2BQ00403 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.56■□□□□ 0.4
GTF2BQ00403 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GTF2BQ00403 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.55■□□□□ 0.4
GTF2BQ00403 AC100757.3-201ENST00000622361 1406 ntBASIC17.55■□□□□ 0.4
GTF2BQ00403 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.55■□□□□ 0.4
GTF2BQ00403 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.55■□□□□ 0.4
GTF2BQ00403 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 AC018892.3-201ENST00000623986 2499 ntBASIC17.55■□□□□ 0.4
GTF2BQ00403 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GTF2BQ00403 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GTF2BQ00403 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms