Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.51■□□□□ 0.39
SNRPFP62306 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.51■□□□□ 0.39
SNRPFP62306 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.51■□□□□ 0.39
SNRPFP62306 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SNRPFP62306 AC004449.1-201ENST00000564240 433 ntBASIC17.51■□□□□ 0.39
SNRPFP62306 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.51■□□□□ 0.39
SNRPFP62306 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.51■□□□□ 0.39
SNRPFP62306 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.51■□□□□ 0.39
SNRPFP62306 AL450472.2-201ENST00000603663 1156 ntBASIC17.51■□□□□ 0.39
SNRPFP62306 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.51■□□□□ 0.39
SNRPFP62306 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.51■□□□□ 0.39
SNRPFP62306 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNRPFP62306 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SNRPFP62306 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.5■□□□□ 0.39
SNRPFP62306 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SNRPFP62306 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SNRPFP62306 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.5■□□□□ 0.39
SNRPFP62306 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.5■□□□□ 0.39
SNRPFP62306 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 HLA-V-204ENST00000476601 1289 ntBASIC17.5■□□□□ 0.39
SNRPFP62306 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.5■□□□□ 0.39
SNRPFP62306 AL079307.3-201ENST00000556114 283 ntBASIC17.5■□□□□ 0.39
SNRPFP62306 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 GPALPP1-207ENST00000611650 899 ntBASIC17.5■□□□□ 0.39
SNRPFP62306 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.5■□□□□ 0.39
SNRPFP62306 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.5■□□□□ 0.39
SNRPFP62306 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.5■□□□□ 0.39
SNRPFP62306 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNRPFP62306 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.5■□□□□ 0.39
SNRPFP62306 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SNRPFP62306 TUBB3P1-201ENST00000405796 1332 ntBASIC17.49■□□□□ 0.39
SNRPFP62306 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 CETN4P-206ENST00000642099 2168 ntBASIC17.49■□□□□ 0.39
SNRPFP62306 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SNRPFP62306 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.49■□□□□ 0.39
SNRPFP62306 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 AC051619.7-201ENST00000568314 623 ntBASIC17.49■□□□□ 0.39
SNRPFP62306 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.49■□□□□ 0.39
SNRPFP62306 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNRPFP62306 Z92544.3-201ENST00000624747 417 ntBASIC17.49■□□□□ 0.39
SNRPFP62306 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.49■□□□□ 0.39
SNRPFP62306 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNRPFP62306 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.49■□□□□ 0.39
SNRPFP62306 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SNRPFP62306 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SNRPFP62306 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNRPFP62306 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.48■□□□□ 0.39
SNRPFP62306 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNRPFP62306 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms