Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
FOXG1P55316 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.15□□□□□ -0.14
FOXG1P55316 BNIP3P1-202ENST00000550043 1585 ntBASIC14.15□□□□□ -0.14
FOXG1P55316 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXG1P55316 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXG1P55316 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXG1P55316 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXG1P55316 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXG1P55316 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.15□□□□□ -0.14
FOXG1P55316 HLA-V-204ENST00000476601 1289 ntBASIC14.15□□□□□ -0.14
FOXG1P55316 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXG1P55316 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXG1P55316 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.15□□□□□ -0.14
FOXG1P55316 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXG1P55316 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
FOXG1P55316 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FOXG1P55316 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
FOXG1P55316 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FOXG1P55316 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
FOXG1P55316 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.15□□□□□ -0.14
FOXG1P55316 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXG1P55316 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.15
FOXG1P55316 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
FOXG1P55316 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
FOXG1P55316 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
FOXG1P55316 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 AC010491.1-201ENST00000563101 2797 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 HAUS4P1-201ENST00000406739 1145 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 AC241585.1-201ENST00000433527 519 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 BCRP1-201ENST00000444246 691 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 AC245100.5-201ENST00000452108 331 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXG1P55316 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.14□□□□□ -0.15
FOXG1P55316 AL512361.1-201ENST00000554200 418 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 SPCS2P1-201ENST00000561636 679 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXG1P55316 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.14□□□□□ -0.15
FOXG1P55316 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 AC026979.3-201ENST00000607315 403 ntBASIC14.14□□□□□ -0.15
FOXG1P55316 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXG1P55316 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.14□□□□□ -0.15
FOXG1P55316 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXG1P55316 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.14□□□□□ -0.15
FOXG1P55316 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 DOC2GP-204ENST00000639052 2548 ntBASIC14.13□□□□□ -0.15
FOXG1P55316 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXG1P55316 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXG1P55316 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 PCDHA1-201ENST00000378133 2726 ntBASIC14.13□□□□□ -0.15
FOXG1P55316 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.13□□□□□ -0.15
FOXG1P55316 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FOXG1P55316 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXG1P55316 SPDYE17-201ENST00000412399 783 ntBASIC14.13□□□□□ -0.15
FOXG1P55316 MRPS18AP1-201ENST00000414458 589 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms