Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BRPF1P55201 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
BRPF1P55201 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
BRPF1P55201 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
BRPF1P55201 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 AL353705.2-201ENST00000428243 662 ntBASIC20.55■□□□□ 0.88
BRPF1P55201 CNN2P2-201ENST00000443536 909 ntBASIC20.55■□□□□ 0.88
BRPF1P55201 CNN2P3-201ENST00000450201 906 ntBASIC20.55■□□□□ 0.88
BRPF1P55201 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.55■□□□□ 0.88
BRPF1P55201 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.55■□□□□ 0.88
BRPF1P55201 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 AL136317.3-201ENST00000618497 906 ntBASIC20.55■□□□□ 0.88
BRPF1P55201 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.55■□□□□ 0.88
BRPF1P55201 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.55■□□□□ 0.88
BRPF1P55201 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BRPF1P55201 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.55■□□□□ 0.88
BRPF1P55201 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BRPF1P55201 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BRPF1P55201 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRPF1P55201 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
BRPF1P55201 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BRPF1P55201 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.54■□□□□ 0.88
BRPF1P55201 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 SPDYE7P-202ENST00000420373 878 ntBASIC20.54■□□□□ 0.88
BRPF1P55201 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.54■□□□□ 0.88
BRPF1P55201 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.54■□□□□ 0.88
BRPF1P55201 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.54■□□□□ 0.88
BRPF1P55201 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.54■□□□□ 0.88
BRPF1P55201 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
BRPF1P55201 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.54■□□□□ 0.88
BRPF1P55201 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.54■□□□□ 0.88
BRPF1P55201 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.54■□□□□ 0.88
BRPF1P55201 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRPF1P55201 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.54■□□□□ 0.88
BRPF1P55201 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.53■□□□□ 0.88
BRPF1P55201 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.53■□□□□ 0.88
BRPF1P55201 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.53■□□□□ 0.88
BRPF1P55201 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.53■□□□□ 0.88
BRPF1P55201 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.53■□□□□ 0.88
BRPF1P55201 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
BRPF1P55201 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.53■□□□□ 0.88
BRPF1P55201 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.53■□□□□ 0.88
BRPF1P55201 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.53■□□□□ 0.88
BRPF1P55201 AP005018.1-201ENST00000525475 301 ntBASIC20.53■□□□□ 0.88
BRPF1P55201 AC051619.7-201ENST00000568314 623 ntBASIC20.53■□□□□ 0.88
BRPF1P55201 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.53■□□□□ 0.88
BRPF1P55201 RN7SL828P-201ENST00000607615 303 ntBASIC20.53■□□□□ 0.88
BRPF1P55201 AC008761.3-201ENST00000624803 892 ntBASIC20.53■□□□□ 0.88
BRPF1P55201 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.53■□□□□ 0.88
BRPF1P55201 AL358472.5-202ENST00000641448 1267 ntBASIC20.53■□□□□ 0.88
BRPF1P55201 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.53■□□□□ 0.88
BRPF1P55201 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BRPF1P55201 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRPF1P55201 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms