Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
EPHB3P54753 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EPHB3P54753 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHB3P54753 Z97205.2-201ENST00000564697 1639 ntBASIC16.81■□□□□ 0.28
EPHB3P54753 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
EPHB3P54753 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
EPHB3P54753 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHB3P54753 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHB3P54753 EEF1DP4-201ENST00000446006 880 ntBASIC16.81■□□□□ 0.28
EPHB3P54753 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB3P54753 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB3P54753 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHB3P54753 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHB3P54753 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB3P54753 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.81■□□□□ 0.28
EPHB3P54753 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB3P54753 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB3P54753 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHB3P54753 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.81■□□□□ 0.28
EPHB3P54753 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EPHB3P54753 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
EPHB3P54753 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
EPHB3P54753 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
EPHB3P54753 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
EPHB3P54753 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHB3P54753 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHB3P54753 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
EPHB3P54753 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
EPHB3P54753 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.8■□□□□ 0.28
EPHB3P54753 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 AC104596.2-201ENST00000512793 793 ntBASIC16.8■□□□□ 0.28
EPHB3P54753 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.8■□□□□ 0.28
EPHB3P54753 IGHV3-72-202ENST00000621503 303 ntBASIC16.8■□□□□ 0.28
EPHB3P54753 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 AC009053.2-201ENST00000563701 2365 ntBASIC16.8■□□□□ 0.28
EPHB3P54753 ME2P1-201ENST00000426028 1970 ntBASIC16.8■□□□□ 0.28
EPHB3P54753 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EPHB3P54753 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.8■□□□□ 0.28
EPHB3P54753 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EPHB3P54753 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHB3P54753 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.79■□□□□ 0.28
EPHB3P54753 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.79■□□□□ 0.28
EPHB3P54753 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
EPHB3P54753 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
EPHB3P54753 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms