Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.11■□□□□ 0.01
RNF144AP50876 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.11■□□□□ 0.01
RNF144AP50876 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 AC132872.1-201ENST00000566986 1195 ntBASIC15.11■□□□□ 0.01
RNF144AP50876 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF144AP50876 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF144AP50876 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 PKD1P5-201ENST00000532415 10291 ntBASIC15.11■□□□□ 0.01
RNF144AP50876 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF144AP50876 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF144AP50876 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.1■□□□□ 0.01
RNF144AP50876 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF144AP50876 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF144AP50876 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF144AP50876 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF144AP50876 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF144AP50876 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF144AP50876 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RNF144AP50876 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF144AP50876 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 C8orf49-201ENST00000525043 1968 ntBASIC15.09■□□□□ 0.01
RNF144AP50876 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RNF144AP50876 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.09■□□□□ 0.01
RNF144AP50876 AC073439.1-201ENST00000624121 1774 ntBASIC15.09■□□□□ 0.01
RNF144AP50876 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF144AP50876 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF144AP50876 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
RNF144AP50876 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF144AP50876 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RNF144AP50876 KRT18P34-201ENST00000488218 1270 ntBASIC15.09■□□□□ 0.01
RNF144AP50876 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 AC109635.5-201ENST00000533593 962 ntBASIC15.09■□□□□ 0.01
RNF144AP50876 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.09■□□□□ 0.01
RNF144AP50876 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF144AP50876 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF144AP50876 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF144AP50876 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms