Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX2P50458 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX2P50458 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LHX2P50458 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.39□□□□□ -0.11
LHX2P50458 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX2P50458 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.39□□□□□ -0.11
LHX2P50458 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX2P50458 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX2P50458 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.39□□□□□ -0.11
LHX2P50458 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LHX2P50458 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LHX2P50458 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LHX2P50458 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.39□□□□□ -0.11
LHX2P50458 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.38□□□□□ -0.11
LHX2P50458 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LHX2P50458 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.38□□□□□ -0.11
LHX2P50458 AL596087.1-201ENST00000400979 1969 ntBASIC14.38□□□□□ -0.11
LHX2P50458 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
LHX2P50458 AC134407.2-201ENST00000625089 1978 ntBASIC14.38□□□□□ -0.11
LHX2P50458 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.38□□□□□ -0.11
LHX2P50458 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.38□□□□□ -0.11
LHX2P50458 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.38□□□□□ -0.11
LHX2P50458 AC114501.2-201ENST00000439631 535 ntBASIC14.38□□□□□ -0.11
LHX2P50458 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.38□□□□□ -0.11
LHX2P50458 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.38□□□□□ -0.11
LHX2P50458 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.38□□□□□ -0.11
LHX2P50458 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.38□□□□□ -0.11
LHX2P50458 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.38□□□□□ -0.11
LHX2P50458 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.38□□□□□ -0.11
LHX2P50458 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.38□□□□□ -0.11
LHX2P50458 AL109936.8-201ENST00000641772 604 ntBASIC14.38□□□□□ -0.11
LHX2P50458 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.38□□□□□ -0.11
LHX2P50458 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
LHX2P50458 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LHX2P50458 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.37□□□□□ -0.11
LHX2P50458 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LHX2P50458 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.37□□□□□ -0.11
LHX2P50458 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LHX2P50458 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.37□□□□□ -0.11
LHX2P50458 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LHX2P50458 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
LHX2P50458 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.37□□□□□ -0.11
LHX2P50458 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.37□□□□□ -0.11
LHX2P50458 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 AC025048.3-201ENST00000590609 569 ntBASIC14.37□□□□□ -0.11
LHX2P50458 AC005702.4-201ENST00000618393 416 ntBASIC14.37□□□□□ -0.11
LHX2P50458 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LHX2P50458 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.37□□□□□ -0.11
LHX2P50458 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LHX2P50458 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LHX2P50458 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms