Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CDC34P49427 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.85□□□□□ -0.35
CDC34P49427 TSPY5P-201ENST00000426936 936 ntBASIC12.85□□□□□ -0.35
CDC34P49427 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 SPDYE13P-201ENST00000445314 798 ntBASIC12.85□□□□□ -0.35
CDC34P49427 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CDC34P49427 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 INTS4P1-201ENST00000438455 1935 ntBASIC12.85□□□□□ -0.35
CDC34P49427 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC34P49427 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CDC34P49427 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC34P49427 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 AC106881.1-201ENST00000605849 3329 ntBASIC12.84□□□□□ -0.35
CDC34P49427 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CDC34P49427 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 RNF152P1-201ENST00000397754 604 ntBASIC12.84□□□□□ -0.35
CDC34P49427 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 AC092647.4-201ENST00000457211 535 ntBASIC12.84□□□□□ -0.35
CDC34P49427 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.84□□□□□ -0.35
CDC34P49427 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.84□□□□□ -0.35
CDC34P49427 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 AL353135.1-201ENST00000606729 504 ntBASIC12.84□□□□□ -0.35
CDC34P49427 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CDC34P49427 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 AC138969.2-201ENST00000532739 9932 ntBASIC12.84□□□□□ -0.35
CDC34P49427 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC34P49427 SNX18-202ENST00000343017 3140 ntBASIC12.84□□□□□ -0.35
CDC34P49427 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC34P49427 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CDC34P49427 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDC34P49427 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
CDC34P49427 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
CDC34P49427 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CDC34P49427 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms