Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 AC020658.6-201ENST00000623564 1870 ntBASIC16.94■□□□□ 0.3
SLC1A1P43005 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SLC1A1P43005 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SLC1A1P43005 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A1P43005 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A1P43005 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLC1A1P43005 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC1A1P43005 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC1A1P43005 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC1A1P43005 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC1A1P43005 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 AL591424.1-201ENST00000442569 1213 ntBASIC16.93■□□□□ 0.3
SLC1A1P43005 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC1A1P43005 RNA5SP416-201ENST00000516838 111 ntBASIC16.93■□□□□ 0.3
SLC1A1P43005 AC105233.2-201ENST00000523697 349 ntBASIC16.93■□□□□ 0.3
SLC1A1P43005 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
SLC1A1P43005 AF228730.5-201ENST00000530288 346 ntBASIC16.93■□□□□ 0.3
SLC1A1P43005 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC1A1P43005 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC1A1P43005 AC099522.2-201ENST00000607001 744 ntBASIC16.93■□□□□ 0.3
SLC1A1P43005 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SLC1A1P43005 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC1A1P43005 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC1A1P43005 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 AKAP8P1-201ENST00000434743 1349 ntBASIC16.93■□□□□ 0.3
SLC1A1P43005 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A1P43005 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC1A1P43005 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC1A1P43005 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC1A1P43005 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC1A1P43005 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 SPTSSB-204ENST00000617024 1292 ntBASIC16.92■□□□□ 0.3
SLC1A1P43005 AL513190.1-201ENST00000621254 727 ntBASIC16.92■□□□□ 0.3
SLC1A1P43005 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms