Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL592424.1-201ENST00000563624 1536 ntBASIC16.42■□□□□ 0.22
RPA3P35244 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.42■□□□□ 0.22
RPA3P35244 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.42■□□□□ 0.22
RPA3P35244 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPA3P35244 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RPA3P35244 SLC25A6P2-201ENST00000497974 877 ntBASIC16.42■□□□□ 0.22
RPA3P35244 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.42■□□□□ 0.22
RPA3P35244 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
RPA3P35244 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPA3P35244 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPA3P35244 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.42■□□□□ 0.22
RPA3P35244 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RPA3P35244 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RPA3P35244 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.42■□□□□ 0.22
RPA3P35244 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.42■□□□□ 0.22
RPA3P35244 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RPA3P35244 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.42■□□□□ 0.22
RPA3P35244 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RPA3P35244 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPA3P35244 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RPA3P35244 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 AC092919.2-201ENST00000623631 1645 ntBASIC16.41■□□□□ 0.22
RPA3P35244 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RPA3P35244 ZNF259P1-201ENST00000407656 1365 ntBASIC16.41■□□□□ 0.22
RPA3P35244 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.41■□□□□ 0.22
RPA3P35244 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.41■□□□□ 0.22
RPA3P35244 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.41■□□□□ 0.22
RPA3P35244 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.41■□□□□ 0.22
RPA3P35244 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.41■□□□□ 0.22
RPA3P35244 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RPA3P35244 CRYGEP-201ENST00000412192 528 ntBASIC16.41■□□□□ 0.22
RPA3P35244 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.41■□□□□ 0.22
RPA3P35244 PRSS29P-201ENST00000440800 595 ntBASIC16.41■□□□□ 0.22
RPA3P35244 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.41■□□□□ 0.22
RPA3P35244 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.41■□□□□ 0.22
RPA3P35244 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.41■□□□□ 0.22
RPA3P35244 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.41■□□□□ 0.22
RPA3P35244 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RPA3P35244 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.41■□□□□ 0.22
RPA3P35244 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RPA3P35244 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.41■□□□□ 0.22
RPA3P35244 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.41■□□□□ 0.22
RPA3P35244 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RPA3P35244 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.41■□□□□ 0.22
RPA3P35244 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RPA3P35244 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPA3P35244 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPA3P35244 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.4■□□□□ 0.22
RPA3P35244 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.4■□□□□ 0.22
RPA3P35244 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RPA3P35244 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 AC020658.6-201ENST00000623564 1870 ntBASIC16.4■□□□□ 0.22
RPA3P35244 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.4■□□□□ 0.22
RPA3P35244 AC005622.1-201ENST00000636801 1703 ntBASIC16.4■□□□□ 0.22
RPA3P35244 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
RPA3P35244 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RPA3P35244 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RPA3P35244 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.4■□□□□ 0.22
RPA3P35244 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.4■□□□□ 0.22
RPA3P35244 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.4■□□□□ 0.22
RPA3P35244 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPA3P35244 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.4■□□□□ 0.22
RPA3P35244 AC145285.3-201ENST00000564603 959 ntBASIC16.4■□□□□ 0.22
RPA3P35244 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
RPA3P35244 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms