Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CTNNA1P35221 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNNA1P35221 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTNNA1P35221 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CTNNA1P35221 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CTNNA1P35221 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNNA1P35221 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CTNNA1P35221 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CTNNA1P35221 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTNNA1P35221 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNNA1P35221 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNNA1P35221 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.14■□□□□ 0.34
CTNNA1P35221 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
CTNNA1P35221 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.14■□□□□ 0.34
CTNNA1P35221 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CTNNA1P35221 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTNNA1P35221 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 IGLL3P-201ENST00000412472 434 ntBASIC17.14■□□□□ 0.33
CTNNA1P35221 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNNA1P35221 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.14■□□□□ 0.33
CTNNA1P35221 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNNA1P35221 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNNA1P35221 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNNA1P35221 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.14■□□□□ 0.33
CTNNA1P35221 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNNA1P35221 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.13■□□□□ 0.33
CTNNA1P35221 AC016027.1-202ENST00000607927 1699 ntBASIC17.13■□□□□ 0.33
CTNNA1P35221 AC006058.4-201ENST00000624016 1670 ntBASIC17.13■□□□□ 0.33
CTNNA1P35221 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTNNA1P35221 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNNA1P35221 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTNNA1P35221 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.13■□□□□ 0.33
CTNNA1P35221 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CTNNA1P35221 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.13■□□□□ 0.33
CTNNA1P35221 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.13■□□□□ 0.33
CTNNA1P35221 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNNA1P35221 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.13■□□□□ 0.33
CTNNA1P35221 AC093724.1-201ENST00000448659 1027 ntBASIC17.13■□□□□ 0.33
CTNNA1P35221 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.13■□□□□ 0.33
CTNNA1P35221 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CTNNA1P35221 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.13■□□□□ 0.33
CTNNA1P35221 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNNA1P35221 AL049840.3-201ENST00000602669 611 ntBASIC17.13■□□□□ 0.33
CTNNA1P35221 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.13■□□□□ 0.33
CTNNA1P35221 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNNA1P35221 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNNA1P35221 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNNA1P35221 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.13■□□□□ 0.33
CTNNA1P35221 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNNA1P35221 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CTNNA1P35221 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.12■□□□□ 0.33
CTNNA1P35221 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CTNNA1P35221 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNNA1P35221 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNNA1P35221 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms