Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SLC6A4P31645 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A4P31645 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SLC6A4P31645 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SLC6A4P31645 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A4P31645 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC6A4P31645 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 FAM207CP-201ENST00000443486 507 ntBASIC16.54■□□□□ 0.24
SLC6A4P31645 EEF1DP4-201ENST00000446006 880 ntBASIC16.54■□□□□ 0.24
SLC6A4P31645 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SLC6A4P31645 SERBP1P3-201ENST00000459980 809 ntBASIC16.54■□□□□ 0.24
SLC6A4P31645 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC6A4P31645 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC6A4P31645 ZNF890P-202ENST00000530367 1156 ntBASIC16.54■□□□□ 0.24
SLC6A4P31645 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC6A4P31645 AC138761.1-201ENST00000584393 385 ntBASIC16.54■□□□□ 0.24
SLC6A4P31645 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.54■□□□□ 0.24
SLC6A4P31645 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC6A4P31645 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC6A4P31645 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC6A4P31645 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.53■□□□□ 0.24
SLC6A4P31645 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 AZGP1P1-201ENST00000411909 902 ntBASIC16.53■□□□□ 0.24
SLC6A4P31645 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC6A4P31645 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.53■□□□□ 0.24
SLC6A4P31645 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 AC004790.1-201ENST00000612686 536 ntBASIC16.53■□□□□ 0.24
SLC6A4P31645 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC6A4P31645 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC6A4P31645 KRT8P37-201ENST00000451609 1420 ntBASIC16.53■□□□□ 0.24
SLC6A4P31645 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SLC6A4P31645 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SLC6A4P31645 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
SLC6A4P31645 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC6A4P31645 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC6A4P31645 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC6A4P31645 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.52■□□□□ 0.24
SLC6A4P31645 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms