Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
SHC1P29353 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 RPS8P6-201ENST00000426177 609 ntBASIC14.88□□□□□ -0.03
SHC1P29353 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.88□□□□□ -0.03
SHC1P29353 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.88□□□□□ -0.03
SHC1P29353 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 KRT18P34-201ENST00000488218 1270 ntBASIC14.88□□□□□ -0.03
SHC1P29353 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
SHC1P29353 AC079140.1-201ENST00000508039 487 ntBASIC14.88□□□□□ -0.03
SHC1P29353 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 AC026120.1-201ENST00000611536 926 ntBASIC14.88□□□□□ -0.03
SHC1P29353 AL691403.2-201ENST00000618460 490 ntBASIC14.88□□□□□ -0.03
SHC1P29353 AC105339.1-204ENST00000636249 355 ntBASIC14.88□□□□□ -0.03
SHC1P29353 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.88□□□□□ -0.03
SHC1P29353 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.88□□□□□ -0.03
SHC1P29353 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHC1P29353 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.87□□□□□ -0.03
SHC1P29353 AL596087.1-201ENST00000400979 1969 ntBASIC14.87□□□□□ -0.03
SHC1P29353 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SHC1P29353 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.87□□□□□ -0.03
SHC1P29353 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.87□□□□□ -0.03
SHC1P29353 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.87□□□□□ -0.03
SHC1P29353 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 SPDYE11-202ENST00000450699 704 ntBASIC14.87□□□□□ -0.03
SHC1P29353 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHC1P29353 AC004967.1-201ENST00000453589 447 ntBASIC14.87□□□□□ -0.03
SHC1P29353 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.87□□□□□ -0.03
SHC1P29353 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 SPDYE9P-201ENST00000570642 692 ntBASIC14.87□□□□□ -0.03
SHC1P29353 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.87□□□□□ -0.03
SHC1P29353 AC022145.2-201ENST00000598203 171 ntBASIC14.87□□□□□ -0.03
SHC1P29353 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.87□□□□□ -0.03
SHC1P29353 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.87□□□□□ -0.03
SHC1P29353 SPDYE10P-202ENST00000612005 668 ntBASIC14.87□□□□□ -0.03
SHC1P29353 SPDYE8P-202ENST00000612377 668 ntBASIC14.87□□□□□ -0.03
SHC1P29353 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.87□□□□□ -0.03
SHC1P29353 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
SHC1P29353 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.87□□□□□ -0.03
SHC1P29353 AKAP8P1-201ENST00000434743 1349 ntBASIC14.87□□□□□ -0.03
SHC1P29353 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHC1P29353 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms